Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYEKVEKIINDWDPIELFPLAPKDEYSQEINKIISIVQENP------NIDMNVLGKGIRKIFIDSFGENLIFKNNEDEIAEKILAL
5A1Y Chain:C ((1128-1163))
----------------LLELGPKPEVAQQTRKILSACEKNPTDACQLNYDMH----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
5A1Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4614 for 110 contacts (-41.9/contact) +
2D Compatibility (PS) -3176 + (NN) -788 + (LL) 3968
1D Compatibility (HY) -2800 + (ID) 0
Total energy: -7410.0 ( -67.36 by residue)
QMean score : 0.168
(partial model without unconserved sides chains):
PDB file :
Tito_5A1Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5A1Y-query.scw
PDB file :
Tito_Scwrl_5A1Y.pdb
: