Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNESNGSMELYLREHTEEIINNWLSKIYENTYTSFVYSPQYKDELRADSEQTADLIISYFAGKKAFFEKLDKWLDNMYARRMENEVPLPEVITTLDKLRREFVTA---VGDFCIHNDEVSKCEFSSSMAMVNHGFD-------RINEAFSAMYYNDIVKHLEQQHRLIEEISTPVISITDKLAILPLMGRVDRERAEKLSEITANKCVHLGVEQLCIDLSGITYFDDALGEMLTNLVTMLKLLGVEAFISGIQPKMAQQINRVDLNLSIPAYHSLKAVLQDQTRTI |
| 3PMC Chain:A ((14-138)) | ----------YLKERQEKFISDWKKKVIIRE------RDPYKEEIIKNGEHLLSAFIMY----------------------LKEEISLQEIEITSKKIARERIDAKVNIAEF-IHNTNVAKIEIMNILTLLNPDLQQYQALVKKINQFFDHLIYYTVHSYYEQK-------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PMC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17113 for 757 contacts (-22.6/contact) +
2D Compatibility (PS) -11985 + (NN) -3071 + (LL) 13136
1D Compatibility (HY) -11600 + (ID) 1750
Total energy: -32383.0 ( -42.78 by residue)
QMean score : 0.390
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