Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLIMNANLEVNAELVKESYVYLLSRYLVLRQENFDTKEDKIPYNTLKHNSVSPADANFVNPNFDVVYSEAWIAVDDEHAVVLEVPEIKNRYYTVQLLDGWGEVVTNINERNFPEHPHGKFAFVKKGTNPSIPSDAIKIELPSEKVKVLLRVEQKDDPEGAVKLQKAFKFDAPDNIKIKEPLEIPHFTNAEFLLEEIYSNLEELLATYPDKMPKAAEFQDKARKVAAYIELGDDQKAEVRNLIVKEALPYFTNGAKGFGTQKGGWSVTYVAGAFENDILARAIINYGGIWANSIQEALYFIGQKGTDDELLTGDKIYKIHFSADELPAELANAFWSVTLYSVPDYHVIPNELNKFCINNYTGPKLSEDGSLTLYIASEKPADVDPGNWLPSKAGKEFSLNFRLYVPKKEVLEGKVFLPPLEVF
3VB9 Chain:A ((363-471))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YLVTYQDSDGNWLSGEHTYKLHVPAN-VPA---SNFWSTTVYDENNRLMIINDAGSPDISSRKNLKVNSDGSIDVYYGP-KPVKGYENNWVQTNPGEGWFTYFRFYGPTEKMFD-----------


General information:
TITO was launched using:
RESULT:

Template: 3VB9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45628 for 720 contacts (-63.4/contact) +
2D Compatibility (PS) -11934 + (NN) -7891 + (LL) 21824
1D Compatibility (HY) -7200 + (ID) 1600
Total energy: -52429.0 ( -72.82 by residue)
QMean score : 0.371

(partial model without unconserved sides chains):
PDB file : Tito_3VB9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VB9-query.scw
PDB file : Tito_Scwrl_3VB9.pdb: