Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVGMTRKKTLFWLCIFLLPNLLGFLIFIAIPILGSLGISFTDWDLVSTIHFTGFENYKRLFNDPEFWKSFRN----TITF--IIGYLPSVMILGLACALMLNQKIKLRPFFRAVYFLP-VITSWVAVSLVWKWLFNPSYGLINYFLSLIGIAGPNWLTDPQTAMIAVIITSAWKDIGFVMVLFLGGLQNISPSYYEAANMDGASKLRQLFSITIPLLTPTTFFVTIISLINSFQVFDQVMIMTEGG--------PSGATMTLVQNIYNHAFRYF---EMGYASAMSWILFIVIFIITIIQNKLQKRWSNY |
3PUY Chain:F ((259-503)) | ---------------------------------------------------TGWKNFTRVFTDEGIQKPFLAIFVWTVVFSLITVFLTVAVGMVLAC-LVQWEALRGKAVYRVLLILPYAVPSFISI-LIFKGLFNQSFGEINMMLSALFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGGGQDFGLAAAIATLIFLLVGALAI------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PUY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171412 for 1542 contacts (-111.2/contact) +
2D Compatibility (PS) -23592 + (NN) -9864 + (LL) 5512
1D Compatibility (HY) -24800 + (ID) 3900
Total energy: -228056.0 ( -147.90 by residue)
QMean score : 0.371
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