Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTEKSGSPKWQLFKNILTYTIICLGGIIMLMPFVWMVSTAFKTGAANMVLPPQFIPKEPTTANFTQVFEMFPMLRFLVNSVIVAVVTTLGQMLFCSMAAYAFARIPFWGRDKLFLLYLATMMVPAQVTMIPQFILMKQFGWLDSYAGLIVPALFSVFGTFLLRQAFMGIPKELEEAAFMDGANHFTIFRKVILPLAKPTFATLGILTFMQSWNSYLWPLIVTSSQEMATLPLGLSLLQGRYGTNYGLMMAGVLI----------------SVIPILAVYLFAQKYFIQGMAMSGMKE |
| 4TQV Chain:B ((30-287)) | ------------------------------LYPIIYIFSMSISSGAAVTQGRVFLLPVDIDFSAYGRVLHDKLFWTSYANTIFYTVFGVVTSLIFIVPGAYALSKPRIRGRRVFGFIIAFTMWFNAG--MIPFFLNMRDLGLLDNRFGILIGFACNAFNIILMRNYFESISASFEEAARMDGANDLQILWKVYIPLAKPALATITLLCAISRWNGYFWAMVLLRAEE--KIPLQVYLKKTIVDLNVNEEFAGALLTNSYSMETVVGAIIVMSIIPVIIVYPVVQKYFTKGVM------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TQV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135025 for 1623 contacts (-83.2/contact) +
2D Compatibility (PS) -25302 + (NN) -11866 + (LL) 3224
1D Compatibility (HY) -27600 + (ID) 3750
Total energy: -200319.0 ( -123.43 by residue)
QMean score : 0.177
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