Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVTDVRLRRVETDGRMRAIASITLDEEFVVHDIRVIDGNNGLFVAMPSKRGVDGEFRDIAHPINSDTRAKIQEVVLAEY----ERVGEEEATAVTEEESESVSAE
2I9Z Chain:A ((5-90))
-KVTDVRLRKIQTDGRMKALVSITLDEAFVIHDLRVIEGNSGLFVAMPSKRTPDGEFRDIAHPINSDMRQEIQDAVMKVYDETDEVI-------------------
General information:
TITO was launched using:
RESULT:
Template:
2I9Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46928 for 481 contacts (-97.6/contact) +
2D Compatibility (PS) -8835 + (NN) -3718 + (LL) 1704
1D Compatibility (HY) -9600 + (ID) 2900
Total energy: -70277.0 ( -146.11 by residue)
QMean score : 0.634
(partial model without unconserved sides chains):
PDB file :
Tito_2I9Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I9Z-query.scw
PDB file :
Tito_Scwrl_2I9Z.pdb
: