Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYIKGRLIFFFVVLVIALCSVLILLIIKISVWKDEPFHLSDAKEIECLGSCEIKNTNQKIHFFSIKENLFEEKGDIAGILNEDEQKVADKSIFIVILDDEKGIANEE
3DL8 Chain:G ((363-405))
--IINRLIFFGALFL----SVIALIPILISVWFNIPFYFGGTTALIVVG----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3DL8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14803 for 190 contacts (-77.9/contact) +
2D Compatibility (PS) -4604 + (NN) -3585 + (LL) 4984
1D Compatibility (HY) -6800 + (ID) 100
Total energy: -24908.0 ( -131.09 by residue)
QMean score : 0.216
(partial model without unconserved sides chains):
PDB file :
Tito_3DL8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DL8-query.scw
PDB file :
Tito_Scwrl_3DL8.pdb
: