Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITFDQLDTELQALENPNTIKIFRNHGCPDSLDLYGLKIGDLKKIIRREKLTKNHELAVKLIESNNSDLIYLGLLAINPNKITTEQIEKW-NIAFRETWSQLTFGLASIVSKRDDALLFAKTWIESDYDLTKSMGWQIYSEHINN-----LPEAET--LLQRAKETLQTETNRTRYSMNGFIITCGIYKDDLHEKAMEAAKSVGKVHVNLGNTACKVPDAISYIEKARNRTK
1T06 Chain:A ((1-225))
-MDFKTVMQELEALGKERTKKIYISNGAHEPV--FGVATGAMKPIAKKIKL--NQELAEELYATGNYDAMYFAGIIADPKAMSESDFDRWIDGAYFYMLSD--YVVAVTLSESNIAQDVADKWIASGDELKMSAGWSCYCWLLGNRKDNAFSESKISDMLEMVKDTIHHSPERTKSAMNNFLNTVAISYVPLHEKAVEIAKEVGIVEVKRDNKKSSLLNASESIQKELDRGR
General information:
TITO was launched using:
RESULT:
Template:
1T06.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84407 for 1744 contacts (-48.4/contact) +
2D Compatibility (PS) -23380 + (NN) -11718 + (LL) 652
1D Compatibility (HY) -12400 + (ID) 3400
Total energy: -134653.0 ( -77.21 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_1T06.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T06-query.scw
PDB file :
Tito_Scwrl_1T06.pdb
: