Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDYLVKALAYDGMARVYAAVTTETIKEAQRRHDTWSVSSAALGRTMTGTLFLGAMQKEDQKITVKIEGDGPIGPIVADSNAQGQIRGYVTNPHVHFSELNEAGKLDVRRGVGTSGMLSVVKDLGFGENFTGQTPIVSGEIGEDFTYYLATSEQINSSVGVGVLVNPDDTIEAAGGFMLQLLPGATD-EIIDEIEKNLMALPTVSRMIEAGETPESILAKLAGGEDKLQILEKIPVSFECNCSKERFGSAIISLGKEEIRSMIEEDHGAEAECHFCRNTYDFSEEELKTLYEEAK |
| 1VQ0 Chain:A ((20-285)) | ----------FDHKVRFSIVRMREVVEEARNRHALSYLATVVLGRALIGAALVTPWLAEKERWTLDIEGNGPIRRVVAQSTSEFTVRGYVANPKVELP-LNEKGKFDVAGAIG-QGVLRVVRDLGLKTPFVSQVPLVSGEIAEDLAYYFAVSEQIPSAFSIGVLVD-SDGVKIAGGFAVQIIDRTLEQEKVEMIEKNIKNLPSISKLFQEAE-PLDVLERIFG--EKVGFVETAEIKYKCDCNREKAKNALLVLDKKELEDMRKEGKG-EVVCKWCNTRYVFS------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VQ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135310 for 2150 contacts (-62.9/contact) +
2D Compatibility (PS) -28226 + (NN) -4292 + (LL) 2524
1D Compatibility (HY) -26000 + (ID) 5100
Total energy: -196404.0 ( -91.35 by residue)
QMean score : 0.497
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