Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDKIYLNELVFYGYHGVLKEETKLGQTFRVSLILGLSTKKAGISDSVEDTVSYADVYETVKEIVEGKPFKLIEALAEKIASEVLTGYPLLEEVTVKLIKPNPPIPGHYDSVAVEIERKRSDLNG
1RRW Chain:A ((3-119))
-DTIFLKGMRFYGYHGALSAENEIGQIFKVDVTLKVDLSEAGRTDNVIDTVHYGEVFEEVKSIMEGKAVNLLEHLAERIANRINSQYNRVMETKVRITKENPPIPGHYDGVGIEIVRE------
General information:
TITO was launched using:
RESULT:
Template:
1RRW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74582 for 816 contacts (-91.4/contact) +
2D Compatibility (PS) -12900 + (NN) -7884 + (LL) 96
1D Compatibility (HY) -11600 + (ID) 2800
Total energy: -109670.0 ( -134.40 by residue)
QMean score : 0.613
(partial model without unconserved sides chains):
PDB file :
Tito_1RRW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RRW-query.scw
PDB file :
Tito_Scwrl_1RRW.pdb
: