Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDKAKQIYLEFKREADFLELDFPLFLGDGPGFGELCMDYSEQDGYMLYGYEHGKRNSEFKTTDFDEFKYEVFLHICWYMGMEFELRHRKEDIERDDNILETDTRKIAFEKTLQLLKMVN---PAWIDKAAIGYSNYLNLWRKNKNVYFDKEAMQFKVNL |
1PXY Chain:A ((166-232)) | -----------------------------------------------------------------------------------------------------------------LCKLINVAVPGTIDERAINTKRVLNPWERNEN-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PXY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4779 for 123 contacts (38.9/contact) +
2D Compatibility (PS) -3008 + (NN) -920 + (LL) 9152
1D Compatibility (HY) -2400 + (ID) 650
Total energy: 6953.0 ( 56.53 by residue)
QMean score : 0.262
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