Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALNIEEIIASVKEASVLELNDLVKAIEEEFGVTAAAPVAVAAAGGAAAEQ-TEFTVELASAGDSKIKVIKVVREITGLGLKEAKELVDNAPKALKEGIAKDEAEEIKAKLEEVGANVEVK
1RQV Chain:A ((5-120))
-----DQIIEAVAAMSVMDVVELISAMEEKFGVSAAAAVAVAAGPVEAAEEKTEFDVILKAAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKALEEAGAEVEVK
General information:
TITO was launched using:
RESULT:
Template:
1RQV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24896 for 764 contacts (-32.6/contact) +
2D Compatibility (PS) -12636 + (NN) -5322 + (LL) 652
1D Compatibility (HY) -10800 + (ID) 3400
Total energy: -56402.0 ( -73.82 by residue)
QMean score : 0.535
(partial model without unconserved sides chains):
PDB file :
Tito_1RQV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RQV-query.scw
PDB file :
Tito_Scwrl_1RQV.pdb
: