Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDEKEKNLNENSENESTPKREVEDTLHTPESAQPVQETPIVEGVTPEGEKFAGATEDAAEASSTNAFFEEASNKESEPARPAPGPRRAGTTGGGAVPPNRVNNGGSGNGNGEPPKRGKHFIGYFLTALIGVIIGGLIIFFVAWDNGDNADTTSNSNNKATKVEKVSVDTTSDVTKAVDKVQDAVVSVLNYQSSSSLDGTTTSEQEASSGSGVIYKKANGKAYIVTNNHVVADANKLEVTFTNGKKSEAKLLGTDEWNDLAVLEIDDKNVTTVAAFGDSDSLKLGEPAIAIGSPLGTEFSGSVTQGIISGLNRAVPVDTNGDGTEDWEADVIQTDAAINPGNSGGALINIEGQVIGINSMKISME--NVEGISFAIPSNTVEPIIEQLETKGEVERPSLGVSLRDVDTIPETQQKNILKLPDSVDYGAMVQQVVSGSAADKAGLKQYDVIVELNGQKVTNSMTLRKILYGNDVKIGDKVKVKYYRDGKEKSTDIKLEAAKTTT |
3MH6 Chain:A ((88-355)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSGVIIDA--DKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFG--LGETVTSGIVSALGRS------GLNAENYE-NFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNI-GIGFAIPSNMVKNLTSQMVEYGQVKRGELGI----MGTELNSELAKAMKV--DAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQV--GTMPVGSKLTLGLLRDGKQVNVNLELQ------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MH6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57285 for 2201 contacts (-26.0/contact) +
2D Compatibility (PS) -28976 + (NN) -7755 + (LL) 8440
1D Compatibility (HY) -22800 + (ID) 5550
Total energy: -113926.0 ( -51.76 by residue)
QMean score : 0.425
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