Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIINSNFRSLGSYIMENIYKIPNYQREYSWEETELEDLWMDLSQIINGETESHFFGQIVIHVDKKEKAKLIIDGQQRTSTAVIFLAAMRELFTEMYNAGWDDAQFDAQDITTKFIGRYTQTRDERKLILGENDKSYFSNRIQSVSSEQLGLQKATKSQKRINFAYNYFYKKLEEEINSSDFLEDKYGLLKTFFSTFTEKCSVMFVETDDFNEAFIIFETLNARGKDLETADLLKNHLFKIANKKVGEVKKNWKQMLEFIGTVDTTKYIRHFWNSQNVFIREKDLYKEIRKKITTQFEAIIFIDDLVRLSEVYGGMKNPAEDNFFETDSQQVLNDLKRLGAKSFYPIILAMVKKDYGPNEIYEVLSAIEVLVVRNFVISGLVANKYETEFSKIAF-------KIYQEEVESVTEIINLIRTNII--ADDVFLNNFSSFKTTNKLRLRYILKKINDSYSKEIAVLNDNNKI-----HLEHIMPIKADGWDIIKEEHEEYLWKIGNLTLLGSEYNKKSTNKIFNDKKDIYEYSEVQLTRKLLDYDEWNIDVIKERQVELAELAVNIWKV |
| 3W38 Chain:A ((39-205)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EAIGYGYQVKNAKVDNSTGKSLTALLQLIRNSPVYGPDIQFLSFTASFEEDDTLRIR-----ITDANNRRWEIPNEVLPRPPPPP----------PTTTVLSHPHSDLVFTLFHTTPFGFTIYRKSTHDVLFDATPI---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W38.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16738 for 620 contacts (27.0/contact) +
2D Compatibility (PS) -10964 + (NN) 1734 + (LL) 36128
1D Compatibility (HY) -6800 + (ID) 1300
Total energy: 35536.0 ( 57.32 by residue)
QMean score : 0.020
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