Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISIVLVSHSQKITEGLQEMIVEMVGDTVHIISSGGTGDGRLGTNAIMIADNIATCTNSEHIYIFCDIGSAILSAETALELLDTDLLEKTTIIDAPLVEGAFTAAVQSLVNPSKEAILQELTNVH
3CT6 Chain:A ((5-116))
---IVIVSHSPEIASGLKKLIRE-VAKNISLTAIGGLENGEIGTSFDRVMNAIEE-NEADNLLTFFDLGSARMNLDLVSEMTDKEL----TIFNVPLIEGAYTASALLEAGATFEAIKEQL----
General information:
TITO was launched using:
RESULT:
Template:
3CT6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101197 for 871 contacts (-116.2/contact) +
2D Compatibility (PS) -12593 + (NN) -5192 + (LL) 1252
1D Compatibility (HY) -6800 + (ID) 1950
Total energy: -126480.0 ( -145.21 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_3CT6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CT6-query.scw
PDB file :
Tito_Scwrl_3CT6.pdb
: