Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKTWEEFLKQEAKQPYFIELMEAVKDARAKGNVYPSEEDMFSCFRLCPYNQVKVVILGQDPYHGPGQAHGLSFSVQKDVRIPPSLRNIYKELKTDLDIEPADHGYLAKWAEQGVLLMNTSWSVEEGKAGSHKKLGWATFTDHVLEELNNYDKPLVFILWGNHAIKAASGITNPQHLIIKGVHPSPLAASRGFFGSKPFSKTNAFLEEHERKPIDWDLNEQ
3ZOQ Chain:A ((8-224))
---SWWNQLKEEFEKPYYQELREMLKREYAEQTIYPDSRDIFNALHYTSYDDVKVVILGQDPYHGPGQAQGLSFSVKPGVKQPPSLKNIFLELQQDIGCSIPNHGSLVSWAKQGVLLLNTVLTVRRGQANSHKGKGWERLTDRIIDVLSERERPVIFILWGRHAQMKKERIDTSKHFIIESTHPSPFSARNGFFGSRPFSRANAYLEKMGEAPIDWCIKD-
General information:
TITO was launched using:
RESULT:
Template:
3ZOQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125064 for 1758 contacts (-71.1/contact) +
2D Compatibility (PS) -23595 + (NN) -12050 + (LL) 584
1D Compatibility (HY) -20000 + (ID) 5250
Total energy: -185375.0 ( -105.45 by residue)
QMean score : 0.701
(partial model without unconserved sides chains):
PDB file :
Tito_3ZOQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZOQ-query.scw
PDB file :
Tito_Scwrl_3ZOQ.pdb
: