Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRQYMKMVRPFDFVIIILLILGSFLPLILFSVAEAKHVGDDVVAIISQDGKVIREIPLTGHKGNEQFTIKGKGAQYNLMEVDGERIRIKEDNSPDQVGVKMGWKSKAGDTIVCLPHKVFVEIKSTNKKSKDPDTDLIVPN |
| 3LD7 Chain:A ((39-125)) | --------------------------------------GDEVVAIISQNGKVIREIPLTGHKGNEQFTIKGKGAQYNLMEVDGERIRIKEDNSPDQVGVKMGWKSKAGDTIVCLPHKVFVEIKST--------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LD7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 3347 for 585 contacts (5.7/contact) +
2D Compatibility (PS) -8722 + (NN) 630 + (LL) 4752
1D Compatibility (HY) -2400 + (ID) 2000
Total energy: -4393.0 ( -7.51 by residue)
QMean score : 0.457
|
|
|