Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKGLKKMKYSIQFSDAIHILAYIEIFKNTNLLSSEIIAGSVKTNPANIRRIMSNLKKANLITTQTGKANPILTKPPEEISLLDVYKSIEGNTNLIHVDPKTNPDCIVGANIQQVLSSKYELLQQKIELEMDEIKLDSIIHDISVLESKDRPQNNEFITKFL
3K69 Chain:A ((9-68))
----------LDFSVAVHSILYLDAHRDSKVASREL-AQSLHLNPVMIRNILSVLHKHGYLTGTVGK----------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3K69.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32969 for 330 contacts (-99.9/contact) +
2D Compatibility (PS) -5953 + (NN) -1297 + (LL) 7228
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -38391.0 ( -116.34 by residue)
QMean score : 0.544
(partial model without unconserved sides chains):
PDB file :
Tito_3K69.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K69-query.scw
PDB file :
Tito_Scwrl_3K69.pdb
: