Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYLVTGATGGLGGYALNYLKELVPMSDIYALVRSKEKGADLKAAGFNIRVGDYSDAESMKQAFAGIDRVLFVSGAP-GNRQVEHENVINAAKKAGVSYIAYTSFAGADKSTSALAEDHFFTEKVIEKSGIAHTFLRNNWYFENEMPMIGGALSAGKFVYAAENGKVGWALKREYAEVAAKAVAGAGFP-EILELSG-PLMTYEELTKALKEATGKDFDVISSDDKGFVENLVSVGLPQPVAEMFLSFQHDIKNDQLDVTSDDFEKALGKPLTNRVDALRELLK |
| 2ZCV Chain:A ((4-281)) | ----ITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLADEHIETEKMLADSGIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGHPTTTLAESVSHL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140784 for 2357 contacts (-59.7/contact) +
2D Compatibility (PS) -30053 + (NN) -14560 + (LL) 768
1D Compatibility (HY) -16400 + (ID) 5250
Total energy: -206279.0 ( -87.52 by residue)
QMean score : 0.613
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