Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKVVVKNVTFGEGAPKICVPMVGKTVAALKEEAEMLQTIDLDVVEWRVDFFEDVKDLAKVEAALGEIRAILPETPILFTFRSAKEGGELAVSDEFYFELNETLAGTGKIDLVDVELFNEEADVLRLIETAHKNNVKVVMSNHDFDKTPAKEEIVSRLTRMEALGADLPKIAVMPKSAGDVLTLLDATNTVFE-KANQPIITMSMAGTGVISRLAGEVFGSAMTFGAAKKASAPGQIDVNELRHVLDLLHKQF
4H3D Chain:A ((7-256))--KVQVKNITIGEGRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVELFMGDEVIDEVVNFAHKKEVKVIISNHDFNKTPKKEEIVSRLCRMQELGADLPKIAVMPQNEKDVLVLLEATNEMFKIYADRPIITMSMSGMGVISRLCGEIFGSALTFGAAK---APGQISFKELNSVLNLLHKS-


General information:
TITO was launched using:
RESULT:

Template: 4H3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134085 for 2072 contacts (-64.7/contact) +
2D Compatibility (PS) -27131 + (NN) -13265 + (LL) 440
1D Compatibility (HY) -29600 + (ID) 7200
Total energy: -210841.0 ( -101.76 by residue)
QMean score : 0.615

(partial model without unconserved sides chains):
PDB file : Tito_4H3D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4H3D-query.scw
PDB file : Tito_Scwrl_4H3D.pdb: