Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIAIAADHGGFQLKEKIRAHLIESGYTVKDFGCYSLESVDFPEYAAKVGHFVAT-ENSLGVLCCGTGIGMSMAANKIKGVRAAVVSDAFSAMMTRRHNNSNVLCLGERVLGDSLALLLLDTWLVAEFEGGRHNTRLQKLAELEEREEDK
3PH3 Chain:A ((21-166))
MKIGIGSDHGGYNLKREIADFLKKRGYEVIDFGTHGNESVDYPDFGLKVAEAVKSGECDRGIVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERVVGLDLALDIVDTWLKAEFQGGRHATRVGKIGEIEKK----
General information:
TITO was launched using:
RESULT:
Template:
3PH3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123873 for 1219 contacts (-101.6/contact) +
2D Compatibility (PS) -16369 + (NN) -12288 + (LL) 196
1D Compatibility (HY) -13200 + (ID) 3700
Total energy: -169234.0 ( -138.83 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_3PH3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PH3-query.scw
PDB file :
Tito_Scwrl_3PH3.pdb
: