Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDKQAILNNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVGNKLLNK
2XHZ Chain:A ((43-179))
-------------------------------------EKMFWCKGKVVVMGMGASGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALL--------------------------
General information:
TITO was launched using:
RESULT:
Template:
2XHZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102529 for 1121 contacts (-91.5/contact) +
2D Compatibility (PS) -14516 + (NN) -8289 + (LL) 4668
1D Compatibility (HY) -8800 + (ID) 2600
Total energy: -132066.0 ( -117.81 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_2XHZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XHZ-query.scw
PDB file :
Tito_Scwrl_2XHZ.pdb
: