Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIVLIASLIFIAQTCLGFFQVKYYQHHMNKVANKYAGKIGYHLYSEMERLKFRTSAVAILVVNENHIVHECQILTGKTVFAQFKTFTNYHHKELSEILTELSSKNKNTIQEKAIIKTVNSCMKAL
2F41 Chain:A ((77-116))
----------------------------------------------EIIDLELDDQAISILEIKQEHVFSRNQIARGHHLFAQ-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2F41.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8946 for 156 contacts (-57.3/contact) +
2D Compatibility (PS) -3528 + (NN) 3536 + (LL) 7712
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -5426.0 ( -34.78 by residue)
QMean score : -0.119
(partial model without unconserved sides chains):
PDB file :
Tito_2F41.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F41-query.scw
PDB file :
Tito_Scwrl_2F41.pdb
: