Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKWEEKRDMVKIATWYYHYGWTQAQIAKKIGISRSIISKTLQRAKDLGIVEIFIKDETYYTVDLEQKLEEKFGLEEAIVVATHDMSEEEALNFLAKEAAYTLSKRIAKVKTLGISWGKTIRKFANEFPFIP-HKDLTIIPLIGGMGSS-DIDLHSNQICYDLKKKMKCHSKYLYAPALVEDTEMKTDLSKNKYISEVLEEGKTVDMAIVGVSSPYNHSTMEEIGYINSEDIEELRYKDVVGDINSRFFTADGKEAKTEINTHVIGLSLEELKNIPTVVALANGLQKKEALVAALNAGLIDVIVITDRMAEYILQKND |
| 3EFB Chain:A ((12-266)) | -----------------------------------------------------------ENLWLEQQLKQKFGLKDVVVVSGNDEDEETQLAMMGLHGAQLLDRLLEPGDIVGFSWGRAVSALVENLPQAGQSRQLICVPIIGGPSGKLESRYHVNTLTYSAAAKLKGESHLADFPALLDNPLIRNGIMQSQHFKTISAYWDNLDIALVGIGSP---------AFYGGEESDDLNARQVAGDICSRFFDIHGAMVETNMSEKTLSIEMNKLKQARYSIGIAMSEEKYSGIIGALRGKYINCLVTNSSTAELLLK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EFB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159908 for 2105 contacts (-76.0/contact) +
2D Compatibility (PS) -26743 + (NN) -10632 + (LL) 6152
1D Compatibility (HY) -16400 + (ID) 3200
Total energy: -210731.0 ( -100.11 by residue)
QMean score : 0.522
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