Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKGSFTKFKQFFIENKFVLGLLIFLLVALDIYVLTKIAFIFDPLMVILKTVAAPIILAGISYYLFNPIIDWLEKHKWKRGWAIALLYLVIIGLLILLFSFVIPAVKDQIVSLFKSFPGYWDQITQKFDEFSRSSLFDQLKDKLNTNMSDIMKTLSTKGTSVINSAISSIGSIVGTVTEVVLAIVTTPLVLFYLLKDGKKLPDFLLKMLPVNGRAHTRQVLGEANHQISSYIRGQIIVSLCIGILLFIGYLIIGLPYALTLAIIAACTSIVPYLGPAIAITPAIIIAIVTSPWLLIKLIIVWCVVQLLEGKFISPQVMGKTLKVHPITILFVILVAGNLFGVLGVIFAVPGYAVLKVIVTHVFIWFKRISGLYGEQPESEYVETPTEEKEL |
| 1MZF Chain:A ((170-215)) | ---------------------------------------------------------------------NWINKQQGKRGWGQLTSNLLLIGME----GNVTPAHYDEQQNFFAQIKGY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MZF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8699 for 165 contacts (-52.7/contact) +
2D Compatibility (PS) -5209 + (NN) -2348 + (LL) 30972
1D Compatibility (HY) -800 + (ID) 800
Total energy: 13116.0 ( 79.49 by residue)
QMean score : 0.420
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