Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHPIEQLLANNNTTATDIESNTRLKEGSLQKIIDKDIRTSDISLRVLSQIAIFLNTGADIIAKQLSDIEVANDLAFLIED
3BD1 Chain:A ((1-50))
MNAIDIAINKLG-SVSALAASLGVRQSAISNWRARGR----VPAERCIDIERVTN-------------------------
General information:
TITO was launched using:
RESULT:
Template:
3BD1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21652 for 315 contacts (-68.7/contact) +
2D Compatibility (PS) -5161 + (NN) 1226 + (LL) 2204
1D Compatibility (HY) -1600 + (ID) 200
Total energy: -25183.0 ( -79.95 by residue)
QMean score : 0.629
(partial model without unconserved sides chains):
PDB file :
Tito_3BD1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BD1-query.scw
PDB file :
Tito_Scwrl_3BD1.pdb
: