Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRSWPDFAAFLLTILTVTWIILTWGLHISDIVPGGEKGIWYKLIPLFLG---IISTI--SVFFVKEKLVKWILLGFNILLLILIYFVYHIGEIGMF
2Q45 Chain:A ((18-106))
-------------------------------LVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQV------------------
General information:
TITO was launched using:
RESULT:
Template:
2Q45.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26135 for 254 contacts (-102.9/contact) +
2D Compatibility (PS) -4887 + (NN) -4843 + (LL) 5184
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -33481.0 ( -131.81 by residue)
QMean score : 0.287
(partial model without unconserved sides chains):
PDB file :
Tito_2Q45.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q45-query.scw
PDB file :
Tito_Scwrl_2Q45.pdb
: