Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTELEKMIAGEMYDPSDRELAHGRNRARKFCREINDAMDSE--SRASVLKRLFGGTKENVYVEPDFRVDYGSNIYVGENFYANFDCVILDVCEVHIGDNCMMAPGVHIYTATHPLDPVERNSGLELGKPVEIGDNVWIGGRAIINPGVKLGNNVVVASGAVVTKSFPDNVVVAGNPARVIKTIEVEEK
2P2O Chain:A ((2-185))
-KSEKEKMLAGHLYNPADLELVKERERARRLVRLYNETLETEYDKRTGLLKELFGSTGERLFIEPNFRCDYGYNIHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHIYTATHPLDPHERNSGLEYGKPVVIGHNVWIGGRAVINPGVTIGDNAVIASGAVVTKDVPANAVVGGNPAKVIKWLK----
General information:
TITO was launched using:
RESULT:
Template:
2P2O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133916 for 1433 contacts (-93.5/contact) +
2D Compatibility (PS) -20237 + (NN) -10906 + (LL) 672
1D Compatibility (HY) -21200 + (ID) 5900
Total energy: -191487.0 ( -133.63 by residue)
QMean score : 0.619
(partial model without unconserved sides chains):
PDB file :
Tito_2P2O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P2O-query.scw
PDB file :
Tito_Scwrl_2P2O.pdb
: