Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKDNRKELIRAYKEKSPDAGVYRFI-STKSGKSLIDNTMDLKGIANKLAFGVKIGAGNMLPPEMAKEAKEHGIDTIQFEILEKVDIKPEMTKEDIKEENDVLLSLWLEREDI
4P3X Chain:A ((97-126))
-------EIIREYREKFPDAPVVLYVNSTSECKTLAD----------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4P3X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1002 for 127 contacts (-7.9/contact) +
2D Compatibility (PS) -3011 + (NN) -551 + (LL) 5844
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -2270.0 ( -17.87 by residue)
QMean score : 0.284
(partial model without unconserved sides chains):
PDB file :
Tito_4P3X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4P3X-query.scw
PDB file :
Tito_Scwrl_4P3X.pdb
: