Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDILRDIGVIARALDSISNIEFKELNLAKGQFIYLVRICENQGIIQEKLVDILKIDRTTASRAIKNLEKNGLIIKKQNKNNKKNKLLFPTEKGQQLYPLIIRENEYSNAVALKGFTEAEINMLTDALKKVKENIADDWLYVKKGNKRSY
1LJ9 Chain:A ((3-145))
--DILREIGMIARALDSISNIEFKELSLTRGQYLYLVRVCENPGIIQEKIAELIKVDRTTAARAIKRLEEQGFIYRQEDASNKKIKRIYATEKGKNVYPIIVRENQHSNQVALQGLSEVEISQLADYLVRMRKNVSEDWEFVKKG-----
General information:
TITO was launched using:
RESULT:
Template:
1LJ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45773 for 905 contacts (-50.6/contact) +
2D Compatibility (PS) -15513 + (NN) -3501 + (LL) 420
1D Compatibility (HY) -16800 + (ID) 4250
Total energy: -85417.0 ( -94.38 by residue)
QMean score : 0.454
(partial model without unconserved sides chains):
PDB file :
Tito_1LJ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LJ9-query.scw
PDB file :
Tito_Scwrl_1LJ9.pdb
: