Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLMVKRGDVYYADLSPVVGSEQGGIRPVLIIQNDIGNRFSPTVIVAAITAKIQKAKLPTHVEA-TRKDGFEKDSVILLEQIRTIDKQRLTDKITHLDEDLMAKVNKALEVSLGVVEF
1NE8 Chain:A ((2-117))LIVKRGDVYFADLSPVVGSEQGGVRPVLVIQNDIGNRFSPTAIVAAITAQIQKAKLPTHVEIDAKRYGFERDSVILLEQIRTIDKQRLTDKITHLDDEMMDKVDEALQISLALIDF


General information:
TITO was launched using:
RESULT:

Template: 1NE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61476 for 840 contacts (-73.2/contact) +
2D Compatibility (PS) -12429 + (NN) -4115 + (LL) 0
1D Compatibility (HY) -16000 + (ID) 4550
Total energy: -98570.0 ( -117.35 by residue)
QMean score : 0.543

(partial model without unconserved sides chains):
PDB file : Tito_1NE8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NE8-query.scw
PDB file : Tito_Scwrl_1NE8.pdb: