Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTFWQDMMNFFSYDNLMYWLSEYRNLGPLLAFLLPFIEAFLPFLPFIVFVVVNVNAYGLLIGFLISVIAAIAGSLCVFLLARKFGQTRFLRFISGHKQIKRVMEWIDRHGFSPIFILLVMPFTPSSAVNIVAGLSKIKVYQFILALVGGKLIKVFAISYIGYDFVDLIHQPLKLAILAVSVVILWFVGKRLEHWMSGKNLK |
1TPX Chain:A ((127-142)) | -------------------------------------------------------------------------GLGGYMLGSAMSRPLI---------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TPX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -271 for 37 contacts (-7.3/contact) +
2D Compatibility (PS) -1556 + (NN) 817 + (LL) 16980
1D Compatibility (HY) -1600 + (ID) 100
Total energy: 14270.0 ( 385.68 by residue)
QMean score : -0.339
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