Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQAIDAILGHYSVRKFEDKDLTEEALTLLIKSAQAASTSSFVQAYSIIGITDKDIREQISAIAGNQPYTVQTGQLFIFVADLARHHAILEEHQVDTAALETSEKWLVSVIDAALAAQNMAIAAESLGLGICFIGGIRNDVEQIAEILDLPPYTMPLFGLTIGHPVANKEKAKPRLPQDLVYHENSYKKMNPETLAEYDKQIKTYYNERTAGKRVEGWSEQIARGLGRPSRLDLKAFLEKQHLNQK
1F5V Chain:A ((1-235))
MTPTIELICGHRSIRHFTDEPISEAQREAIINSARATSSSSFLQCSSIIRITDKALREELVTLTGGQKHVAQAAEFWVFCADFNRHLQICPDAQLGLA-----EQLLLGVVDTAMMAQNALIAAESLGLGGVYIGGLRNNIEAVTKLLKLPQHVLPLFGLCLGWPADNPD-LKPRLPASILVHENSYQPLDKGALAQYDEQLAEYYLTRGSNNRRDTWSDHIRRTIIKESRPFILDYLHKQ-----
General information:
TITO was launched using:
RESULT:
Template:
1F5V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116689 for 1671 contacts (-69.8/contact) +
2D Compatibility (PS) -26042 + (NN) -15932 + (LL) 836
1D Compatibility (HY) -21600 + (ID) 5050
Total energy: -184477.0 ( -110.40 by residue)
QMean score : 0.544
(partial model without unconserved sides chains):
PDB file :
Tito_1F5V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F5V-query.scw
PDB file :
Tito_Scwrl_1F5V.pdb
: