Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENYSHRFQVNLAGMIDILSNHLYDEKDVYIRELLQNATDA---IRARKKIDSTL---EGKIHASLTGDNNEKTLIIEDNGIGLTEDEVHAFLATIANSSKGEKNF---DGESSNDFIGRFGIGLLSCFIVSDEIVMISTS--QKDGGTTEWRGKADGTYSVRKIETDTREPGTQVYLRLRAGLEDHPECEDVEYLINTLKKYGASLESNIIVEMNGLEEE----INSWTKQFSDKETLSTLSREQII--QYGEYI--LGTHFQDYFLIEN---ESGRTFGIAYMIPHAVQMNAIRKN-----TVFLNKMFVTSEANNILPDWSFFAKCVIWTDELQPVASREAFYKNERLTSVASELGVALKKGIETLPEEALMKLLATHYLGF--------KALASED-------APFLKLIYPYL--PVRTLNGEEKLGDIIAKNDVIYYTYSVDDFRQIK-----DIARSSGMTLINGGYSYDSPILAQLSYFVEGTEFVLIQPEEMTDKLRPMTADEKQAYQPILTEMNSMMAEFDTDVLIKHFEPKDLPIIFIHSTATQELRELERAVEETTSVFSDILESIQKEQEPAPLAHLYLNLDNELIKRLFTSEKTVKELSVIVNVLYIQALLLGHYPLKRKEMVLMNQNMLRILEML |
| 1Y4S Chain:A ((9-483)) | -------FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKS--GTKSFLES-----SQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKEDR--GTEITLHLREGEDEFLDDWRVRSIISKYSDHIA-----LPVEIEKREEKDGETVISWEK-INKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPWDMWNRDHKHGLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSSDLPLNVSREILQD----STVTRNLRNALTKRVLQMLEK-LAKDDAEKYQTFWQQFGLVLKEGPAEDFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYI-TADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEF-DGKPFQSV---------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y4S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185128 for 3081 contacts (-60.1/contact) +
2D Compatibility (PS) -43694 + (NN) -8245 + (LL) 15484
1D Compatibility (HY) -26800 + (ID) 5900
Total energy: -254283.0 ( -82.53 by residue)
QMean score : 0.387
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