Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQLITTENKLAGSKKALEIIEKGITSGEVNTLGLATGSTPETLYAELVKSDVDTKNVTTTNLDEYVGLAASDPNSYHYYMNDLLFSKKAFKESFLPNGEATDAEAECARYEEILSEHPIDIQVLGIGTNGHIGFNEPGTSFDSITHKVVLTDSTREANKRFFEREEDVPTHAYSMGIKSIMNAKKIILLAFGENKAQAIKETIKGPVDVNCPASVLQNHPDVTVILDNEAASLL
2RI1 Chain:A ((3-233))
MKTIKVKNKTEGSKVAFRMLEEEITFG-AKTLGLATGSTPLELYKEIRESHLDFSDMVSINLDEYVGLSADDKQSYAYFMKQNLFAAKPFKKSYLPNGLAADLAKETEYYDQILAQYPIDLQILGIGRNAHIGFNEPGTAFSSQTHLVDLTPSTIAANSRFFEKAEDVPKQAISMGLASIMSAKMILLMAFGEEKAEAVAAMVKGPVTEEIPASILQTHPKVILIVDEKAGA--
General information:
TITO was launched using:
RESULT:
Template:
2RI1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93777 for 1948 contacts (-48.1/contact) +
2D Compatibility (PS) -25496 + (NN) -15680 + (LL) 456
1D Compatibility (HY) -21200 + (ID) 6350
Total energy: -162047.0 ( -83.19 by residue)
QMean score : 0.609
(partial model without unconserved sides chains):
PDB file :
Tito_2RI1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RI1-query.scw
PDB file :
Tito_Scwrl_2RI1.pdb
: