Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINQKKIAGEKACEWIKDGMVVGLGTGSTVYYTIEKLGEMVNNGLHITGVATSEETNKQAQNLGIPLKSLNDVTEIDITIDGADEIDTDFQGIKGGGGALLREKMVASASLKNIWVVSEEKLVRNLGKFPLPLEVIPFGWKQVERKLEKEHIQTNLR-----KQSSGEVYVTNNGNYILDIVNQTFTDAEMWQEKLAQIPGIVEHGLFLHYVDIIICAKANGEIELIKK
3HHE Chain:A ((28-251))
----KKMAALKALEFVEDDMRLGIGSGSTVNEFIPLLGERVANGLRVTCVATSQYSEQLCHKFGVPISTLEKIPELDLDIDGADEIGPEMTLIKGGGGALLHEKIVASASRAMFVIADETKMVKTLGAFALPIEVNPFGIHATRIAIEKAADNLGLSGEITLRMNGDDPFKTDGGHFIFDAFWGRILQPKLLSEALLAIPGVVEHGLFLGLASRAIVAMADSQIKVLE-
General information:
TITO was launched using:
RESULT:
Template:
3HHE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103383 for 1854 contacts (-55.8/contact) +
2D Compatibility (PS) -23683 + (NN) -6905 + (LL) 516
1D Compatibility (HY) -19600 + (ID) 4550
Total energy: -157605.0 ( -85.01 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_3HHE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HHE-query.scw
PDB file :
Tito_Scwrl_3HHE.pdb
: