Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFHVKQNNNLAVGEVDVYCHPDNLEEVTNIVMGIDEPTEKISVKKDGATYLLEPKAILYFEAV--ESKIFVYTEKEIYEIHWKLYELEEKFKDSSFFRCSKSMILNIEWIEKIAPGFHGKFEAKLFNREKVIISRQYAKVLKQKLNMGGKRK
3BS1 Chain:A ((1-78))
----------------------------------MDNSVETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDNRQIEFYGNLKELSQL--DDRFFRCHNSFVVNRHNIESI---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3BS1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48686 for 482 contacts (-101.0/contact) +
2D Compatibility (PS) -8200 + (NN) 265 + (LL) 5144
1D Compatibility (HY) -6400 + (ID) 1050
Total energy: -58927.0 ( -122.26 by residue)
QMean score : 0.428
(partial model without unconserved sides chains):
PDB file :
Tito_3BS1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BS1-query.scw
PDB file :
Tito_Scwrl_3BS1.pdb
: