Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKLTNVVKKFGKIEAVKGINLEVEKGSLFAFLGENGAGKSTTLSMICTESEPTSGEIYIDDEKLTFKNRKLFRQKLGVVFQENVLDDLLTVRENLYNRASLYGKTKAEITERLALVSSIMGIEDILNRRFEKLSGGQKRRAEIARAIMHDPEILLLDEPTTGLDPKTRVSVWKIIDYLREELGMTVFLTTHYLEEA-KDADQLAVIHKGKIIAQGTPTNIRSRFSVDKIFFYDAKVAELQKIMKKANLPFKVSKATMRVDVITQDVEILAILNQAAGLYGSFEVIKGNLDDAFISMIKEESDD |
2IT1 Chain:A ((4-221)) | -IKLENIVKKFGNFTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKIYFDEKDVTELPPK--DRNVGLVFQNWALYPHMTVYKNIAFPLELRKAPREEIDKKVREVAKMLHIDKLLNRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEV----------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104364 for 1747 contacts (-59.7/contact) +
2D Compatibility (PS) -23511 + (NN) -5373 + (LL) 7488
1D Compatibility (HY) -18000 + (ID) 4500
Total energy: -148260.0 ( -84.87 by residue)
QMean score : 0.477
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