Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLEKNYKFLLWIYIFWFLGSVLLVSLHIIPPELTAVQSLFLVFTGVFAAVFFIMQYGKWLGSAITLLIFVVSTCIEWMQLSYTDEYIGSTLGGSVYGIPITMGFIWVGMVAGTHIIAREITLKINIDWIRGGIYSFIAATMVMIFEVLIEPITMQSKQLYITQNGFTILQLSDFINWWLLGLILHLMIYFILSLTDSWERLKYPDLKSEIVIVYWIIIAFFVFLSFYLDLWTSIAIIIVSNIIFTACYFFSLEKETQTKKKSE |
| 3NY8 Chain:A ((102-133)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILMKMWTFGNFWCEFWTSIDVLCVTASIWTLC---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NY8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13777 for 120 contacts (-114.8/contact) +
2D Compatibility (PS) -2935 + (NN) 2827 + (LL) 22220
1D Compatibility (HY) -6400 + (ID) 550
Total energy: 1385.0 ( 11.54 by residue)
QMean score : 0.168
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