Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LVIYLLAGFFLLLFIVLSFIDRRRISNGIILTMALFFSVLSVVYATFSKGNELLVSVMGTVLLLLVLLIPFFVVGIATMLIVNGRLMLKREGRKLANMLPLIIGLGILALIITWFGSILKTGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPRYNQDFLIVLGSGLIGGDRVPPLLASRLNRAIKFYDKQYAKKGKRATFIVSGGQGANETISEAEAMRGYLIEQGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSLFSTNNFHLFRAGIYARKAGLKSQGIGAKTALYYMPNALIREFIAITVMYKKVHMVLLGLLLLFFAFLAIIGVTFR |
1OE9 Chain:A ((117-230)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------PIYGED-IINAYSGQNMGDMDPHIFAV----AEEAY-KQMARDERNQSIIVSGESGAGKTVSAKYAMR---------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OE9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4795 for 329 contacts (-14.6/contact) +
2D Compatibility (PS) -7218 + (NN) -7142 + (LL) 26892
1D Compatibility (HY) -2000 + (ID) 1300
Total energy: 4437.0 ( 13.49 by residue)
QMean score : 0.249
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