Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFSKLMMAVCSGLLLVATAIGTVGYYFFSEGSWYKILIEQKIFYIPFVVFVPLTAISIGLIIGGLIGYFVKQKFESIDFSIRLLGQGDLEKKITSEEDENFLEVQQVYKQIDRLRDKMKAQTILTQKLASDRAESTGQTKEAILSEERHRIARELHDSVSQQLFAAMMLLSALNEQSEKSATPAMQKQLKMVESIVNESQSEMRALLLHLRPTQLEGKSLKTGIEQLLKELTTKLPIEVEWQIEDISLQKGIEDHLFRIVQELLSNTLRHSKAKLLEVRLVTMDNLAVMKVVDDGVGFDMDNVRQGSYGLQNMRERVAEFGGTIKIISFPGRGTSVEIKIPLVAKKDVESE |
| 3GIG Chain:A ((26-216)) | --------------------------------------------------------------------------------------------------------------------------------------------------EERQRIARDLHDTLGQKL-SLIGLKSDLARKLIYKDPEQAARELKSVQQTARTSLNEVRKIVSSMKGIRLKDELI--NIKQILEAADIMFIYEEEKWPENISLLN--ENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKGEENSFS--HGLLGMRERLEFANGSLHIDT--ENGTKLTMAIPNN-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GIG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61796 for 1284 contacts (-48.1/contact) +
2D Compatibility (PS) -20901 + (NN) -8319 + (LL) 13176
1D Compatibility (HY) -6400 + (ID) 2900
Total energy: -87140.0 ( -67.87 by residue)
QMean score : 0.509
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