Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEGFAVIGLGRFGGSICRSLVEQGMEVLAIDSDEERVNEYMSIATHAVIANSTDENALRQLGIRNFEHVIVAIGEDIQSSILTTLILKEMGVKYVTAKATNDKHAKLLDKIGADRVVHPERDMGRRIAHYIVSKNMLDYLELSDEYSLVEISVSDPRFLGKSLVDLDFRNSFGVNIVGIKKDKQMIITPEANDVLHEGDILIVIGSDDDIERLQEKIQ
4J91 Chain:A ((9-218))
----FAVIGLGRFGGSICKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKVLEKIGADRIIHPEKDMGVKIAQSLSDENVLNYIDLS----IVEL-L----LDSKSIIDLNVRA--GCTILAIKHHGDICLSPAPEDIIREQDCLVIMGHKKDIKRFE----
General information:
TITO was launched using:
RESULT:
Template:
4J91.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -158861 for 1477 contacts (-107.6/contact) +
2D Compatibility (PS) -20689 + (NN) 1229 + (LL) 720
1D Compatibility (HY) -24800 + (ID) 5350
Total energy: -207751.0 ( -140.66 by residue)
QMean score : 0.646
(partial model without unconserved sides chains):
PDB file :
Tito_4J91.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J91-query.scw
PDB file :
Tito_Scwrl_4J91.pdb
: