Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSELKLKSFEIRKDVLKMIYDAKTGHTGSDLSCADILVALCYGVLNVNPENPEALDRDRYVQSKGHAVEVLWAVLADKGFFAKEELADFSAFGSRIIGHPNNKVAGIEMNTGSLGHGLSVSVGMALAAK-MDGKSYHTYTLMGDGELAEGSVWEGAMAAANYKLDNLTAIIDRNSLQISGRTEDVMSVEPLADKWRAFGWDVIEADGNNPDKLQAIFKTVNETGKPRLIIAKTIKGYGVKMAENVAKWHHYVPSSEEYEIAMKDLEERMEACRHE |
| 4KXV Chain:A ((12-258)) | LQALKDTANRLRISSIQATTAAGSGHPTSCCSAAEIMAVLFFHTMRYKSQDPRNPHNDRFVLSKGHAAPILYAVWAEAGFLAEAELLNLRKISSDLDGHPVPKQAFTDVATGSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAILDINRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEELCKAFGQAKH--QPTAIIAKTFKGRGITGVEDKESWH-------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4KXV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -84526 for 2200 contacts (-38.4/contact) +
2D Compatibility (PS) -26672 + (NN) -11709 + (LL) 2204
1D Compatibility (HY) -12800 + (ID) 4800
Total energy: -138303.0 ( -62.87 by residue)
QMean score : 0.473
|
|
|