Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTMDDIVREGHPALREVATEVTFPLSDEEKKLGRDMLEFLINSQDEDLAEKYGLRGGVGIAAPQLAVTKRFLAIHVHDEKDRLYSYVLYNPKIRSHSVQQACLSGGEGCLSVDREVPGYVVRSERVTIDAFDENGTPLKLRFKGYPAIVIQHEIDHLNGIMFYDHINKENPSYLPPDVDVFG
3G6N Chain:A ((5-183))
MITMDDIIREGNPTLREVAKEVSLPLSEEDISLGKEMLEFLKNSQDPIKAEELHLRGGVGLAAPQLDISKRIIAVHVPS----SLSTVMYNPKILSHSVQDACLGEGEGCLSVDREVPGYVVRHAKITVSYYDMNGEKHKIRLKNYESIVVQHEIDHINGVMFYDHINDQNPFAL--------
General information:
TITO was launched using:
RESULT:
Template:
3G6N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99082 for 1325 contacts (-74.8/contact) +
2D Compatibility (PS) -18511 + (NN) -9020 + (LL) 104
1D Compatibility (HY) -20400 + (ID) 5500
Total energy: -152409.0 ( -115.03 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_3G6N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G6N-query.scw
PDB file :
Tito_Scwrl_3G6N.pdb
: