Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAENTKNENITNILTQKLIDTRTVLIYGEINQELAEDVSKQLLLLESISNDPITIFINSQGGHVEAGDTIHDMIKFIKPTVKVVGTGWVASAGITIYLAAEKENRFSLPNTRYMIHQPAGGVQGQSTEIEIEAKEIIRMRERINRLIAEATGQSYEQISKDTDRNFWLSVNEAKDYGIVNEIIENRDGLK
4JCR Chain:A ((13-190))
------------ILTQKLIDTRTVLIYGEINQELAEDVSKQLLLLESISNDPITIFINSQGGHVEAGDTIHDMIKFIKPTVKVVGTGWVASAGITIYLAAEKENRFSLPNTRYMIHQPAG-------EIEIEAKEIIRMRERINRLIAEATGQSYEQISKDTDRDFWLSVNEAKDYGIVNEIIENRDGLK
General information:
TITO was launched using:
RESULT:
Template:
4JCR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102281 for 1292 contacts (-79.2/contact) +
2D Compatibility (PS) -18691 + (NN) -5308 + (LL) 724
1D Compatibility (HY) -24000 + (ID) 8500
Total energy: -158056.0 ( -122.33 by residue)
QMean score : 0.580
(partial model without unconserved sides chains):
PDB file :
Tito_4JCR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JCR-query.scw
PDB file :
Tito_Scwrl_4JCR.pdb
: