Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEKAVQLTEFVGTA-IGDTIGLVIANVDGQLLEAMKLEKSYRSIGILGARTGAGPHIMAADEAVKATNTEVVKIELPRDTKGGAGHGSLIIFGGDDVSDVKRAVEVALNELDKTFGDVYGNEAGHIELQYTARASHALEKAFGAPVGKAFGLMVGAPAGIGVVMADTAVKSANVDVVAYSSPADGTSFSNEVILCISGDSGAVRQAVISAREIGKKLLGALGDEPKNDRPSYI
4I61 Chain:A ((31-257))
-------VPEFVGASEIGDTIGMVIPRVDQQLLDKLHVTKQYKTLGILSDRTGAGPQIMAMDEGIKATNMECIDVEWPRDTKGGGGHGCLIIIGGDDPADARQAIRVALDNLHRTFGDVYNAKAGHLELQFTARAAGAAHLGLGAVEGKAFGLICGCPSGIGVVMGDKALKTAGVEPLNFTSPSHGTSFSNEGCLTITGDSGAVRQAVMAGREVGLKLLSQFGEEPVNDFPSYI
General information:
TITO was launched using:
RESULT:
Template:
4I61.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114371 for 2073 contacts (-55.2/contact) +
2D Compatibility (PS) -24362 + (NN) -14599 + (LL) 804
1D Compatibility (HY) -22800 + (ID) 6800
Total energy: -182128.0 ( -87.86 by residue)
QMean score : 0.584
(partial model without unconserved sides chains):
PDB file :
Tito_4I61.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I61-query.scw
PDB file :
Tito_Scwrl_4I61.pdb
: