Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VEREELKAIIKQIVADKLSGAETEIPIGVSNRHIHLTETDYNQLFPNEPIQVKKWLKQPGEFAAEQTLTVVSEKGELHRVRILGPLRKFSQVELSKTDARMLGMKIPIRVSGDIEGTPGIKLVSKHSEICLPKGAIVAKRHIHLPESVANEFGVKQGDEVSVLVGSEMRSLVLNHCTIRVNNQFIPEMHIDTDEANAADIAGTNFAKIIKS |
| 3U95 Chain:A ((314-355)) | -----------------------------------------------------------------------------------------------------------IKLAEEVQENPHLKITEKHPEI-FPKGRLSGEQHIPFINAIAN------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U95.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5525 for 173 contacts (-31.9/contact) +
2D Compatibility (PS) -4014 + (NN) 2636 + (LL) 12704
1D Compatibility (HY) -3600 + (ID) 700
Total energy: 1501.0 ( 8.68 by residue)
QMean score : 0.048
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