Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSIRYIVKTDVAETFEIIKAGQVGSNIVFSEVRTFDFGELATLACEKFYFRSSNRAALFV-------TINNFHGETEVTIISTGSSNGFFTGIDWGAAFDYMHSVVADLKRVAIREVAIEKQEEI
3EUJ Chain:A ((23-146))
---------------------------------RTFDFDELVTTLSGGNGAGKSTTMAGFVTALIPDLTLLNFRNTTEAGSTSSSRDKGLYGKLKAGVCYAVLETVNSRAQRI-------------
General information:
TITO was launched using:
RESULT:
Template:
3EUJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5878 for 310 contacts (-19.0/contact) +
2D Compatibility (PS) -7609 + (NN) 1409 + (LL) 4664
1D Compatibility (HY) -1200 + (ID) 1100
Total energy: -9714.0 ( -31.34 by residue)
QMean score : -0.271
(partial model without unconserved sides chains):
PDB file :
Tito_3EUJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EUJ-query.scw
PDB file :
Tito_Scwrl_3EUJ.pdb
: