Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKLGNDWDELLKNEFNQPYYLTLRQFLKKEYQTKKVFPDMYDIFNALKHTAYKDVKVVILGQDPYHGPGQAHGLSFSVQQGVQIPPSLQNIYLELHNDLNCEIPNNGYLIPWADQGVLLLNTVLTVRAGQANSHRGQGWEILTNHIIEIINQKEEPVVFLLWGSNAKEKLQLLTNPKHTAFTSVHPSPLSASRGFMGCKHFSKTNQFLEQNGVKPIDWQIPSI
3ZOR Chain:A ((5-225))
---LQDSWWNQLKEEFEKPYYQELREMLKREYAEQTIYPDSRDIFNALHYTSYDDVKVVILGQDPYHGPGQAQGLSFSVKPGVKQPPSLKNIFLELQQDIGCSIPNHGSLVSWAKQGVLLLNTVLTVRRGQANSHKGKGWERLTDRIIDVLSERERPVIFILWGRHAQMKKERIDTSKHFIIESTHPSPFSARNGFFGSRPFSRANAYLEKMGEAPIDWCIKDL
General information:
TITO was launched using:
RESULT:
Template:
3ZOR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111466 for 1810 contacts (-61.6/contact) +
2D Compatibility (PS) -23592 + (NN) -8590 + (LL) 476
1D Compatibility (HY) -22400 + (ID) 6400
Total energy: -171972.0 ( -95.01 by residue)
QMean score : 0.626
(partial model without unconserved sides chains):
PDB file :
Tito_3ZOR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZOR-query.scw
PDB file :
Tito_Scwrl_3ZOR.pdb
: