Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKEITDATFEQETSEGLVLTDFWATWCGPCRMVAPVLEEIQEERGEALKIVKMDVDENPETPGSFGVMSIPTLLIKKDGEVVETIIGYRPKEELDEVINKYV
2GZZ Chain:A ((7-104))
-----TDQSFSAETSEGVVLADFWAPWCGPCKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLKDGEVVETSVGFKPKEALQELVNKHL
General information:
TITO was launched using:
RESULT:
Template:
2GZZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49946 for 711 contacts (-70.2/contact) +
2D Compatibility (PS) -10044 + (NN) 754 + (LL) 772
1D Compatibility (HY) -12800 + (ID) 3300
Total energy: -74564.0 ( -104.87 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_2GZZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GZZ-query.scw
PDB file :
Tito_Scwrl_2GZZ.pdb
: